Acetylation by gcn5 regulates cdc6 phosphorylation in the s phase of the cell cycle

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ABSTRACT In eukaryotic cells, the cell-division cycle (CDC)-6 protein is essential to promote the assembly of pre-replicative complexes in the early G1 phase of the cell cycle, a process


requiring tight regulation to ensure that proper origin licensing occurs once per cell cycle. Here we show that, in late G1 and early S phase, CDC6 is found in a complex also containing


Cyclin A, cyclin-dependent kinase (CDK)-2 and the acetyltransferase general control nonderepressible 5 (GCN5). GCN5 specifically acetylates CDC6 at three lysine residues flanking its


cyclin-docking motif, and this modification is crucial for the subsequent phosphorylation of the protein by Cyclin A–CDKs at a specific residue close to the acetylation site. GCN5-mediated


acetylation and site-specific phosphorylation of CDC6 are both necessary for the relocalization of the protein to the cell cytoplasm in the S phase, as well as to regulate its stability.


This two-step, intramolecular regulatory program by sequential modification of CDC6 seems to be essential for proper S-phase progression. Access through your institution Buy or subscribe


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CARM1 S217 PHOSPHORYLATION BY CDK1 IN LATE G2 PHASE FACILITATES MITOTIC ENTRY Article Open access 25 March 2025 INTERPLAY BETWEEN P300 AND HDAC1 REGULATE ACETYLATION AND STABILITY OF API5 TO


REGULATE CELL PROLIFERATION Article Open access 12 August 2021 ACETYLATION-DEPENDENT COUPLING BETWEEN G6PD ACTIVITY AND APOPTOTIC SIGNALING Article Open access 05 October 2023 REFERENCES *


Lei, M. & Tye, B.K. Initiating DNA synthesis: from recruiting to activating the MCM complex. _J. Cell Sci._ 114, 1447–1454 (2001). CAS  PubMed  Google Scholar  * Bell, S.P. The origin


recognition complex: from simple origins to complex functions. _Genes Dev._ 16, 659–672 (2002). Article  CAS  Google Scholar  * Blow, J.J. & Dutta, A. Preventing re-replication of


chromosomal DNA. _Nat. Rev. Mol. Cell Biol._ 6, 476–486 (2005). Article  CAS  Google Scholar  * Nishitani, H. & Lygerou, Z. Control of DNA replication licensing in a cell cycle. _Genes


Cells_ 7, 523–534 (2002). Article  CAS  Google Scholar  * Nasmyth, K. Viewpoint: putting the cell cycle in order. _Science_ 274, 1643–1645 (1996). Article  CAS  Google Scholar  * Diffley,


J.F. Regulation of early events in chromosome replication. _Curr. Biol._ 14, R778–R786 (2004). Article  CAS  Google Scholar  * Dutta, A. & Bell, S.P. Initiation of DNA replication in


eukaryotic cells. _Annu. Rev. Cell Dev. Biol._ 13, 293–332 (1997). Article  CAS  Google Scholar  * Stillman, B. Initiation of eukaryotic DNA replication _in vitro_. _Annu. Rev. Cell. Biol._


1989, 197–245 (1989). Article  Google Scholar  * Leatherwood, J. Emerging mechanisms of eukaryotic DNA replication initiation. _Curr. Opin. Cell Biol._ 10, 742–748 (1998). Article  CAS 


Google Scholar  * Coleman, T.R., Carpenter, P.B. & Dunphy, W.G. The _Xenopus_ Cdc6 protein is essential for the initiation of a single round of DNA replication in cell-free extracts.


_Cell_ 87, 53–63 (1996). Article  CAS  Google Scholar  * Tanaka, T., Knapp, D. & Nasmyth, K. Loading of an Mcm protein onto DNA replication origins is regulted by Cdc6p and CKDs. _Cell_


90, 649–660 (1997). Article  CAS  Google Scholar  * Donovan, S., Harwood, J., Drury, L.S. & Diffley, J.F. Cdc6p-dependent loading of Mcm proteins onto pre-replicative chromatin in


budding yeast. _Proc. Natl. Acad. Sci. USA_ 94, 5611–5616 (1997). Article  CAS  Google Scholar  * Jiang, W., Wells, N.J. & Hunter, T. Multistep regulation of DNA replication by Cdk


phosphorylation of HsCdc6. _Proc. Natl. Acad. Sci. USA_ 96, 6193–6198 (1999). Article  CAS  Google Scholar  * Petersen, B.O., Lukas, J., Sorensen, C.S., Bartek, J. & Helin, K.


Phosphorylation of mammalian CDC6 by cyclin A/CDK2 regulates its subcellular localization. _EMBO J._ 18, 396–410 (1999). Article  CAS  Google Scholar  * Petersen, B.O. et al. Cell cycle- and


cell growth-regulated proteolysis of mammalian CDC6 is dependent on APC-CDH1. _Genes Dev._ 14, 2330–2343 (2000). Article  CAS  Google Scholar  * Saha, P . et al. Human CDC6/Cdc18 associates


with Orc1 and Cyclin-CDK and is selectively eliminated from the nucleus at the onset of S-phase. _Mol. Cell. Biol._ 18, 2758–2767 (1998). Article  CAS  Google Scholar  * Williams, R.S.,


Shohet, R.V. & Stillman, B. A human protein related to yeast Cdc6p. _Proc. Natl. Acad. Sci. USA_ 94, 142–147 (1997). Article  CAS  Google Scholar  * Mailand, N. & Diffley, J.F. CDKs


promote DNA replication origin licensing in human cells by protecting Cdc6 from APC/C-dependent proteolysis. _Cell_ 122, 915–926 (2005). Article  CAS  Google Scholar  * Mendez, J. &


Stillman, B. Chromatin association of human origin recognition complex, CDC6, and minichromosome maintenance proteins during the cell cycle: assembly of prereplication complexes in late


mitosis. _Mol. Cell. Biol._ 20, 8602–8612 (2000). Article  CAS  Google Scholar  * Delmolino, L.M., Saha, P. & Dutta, A. Multiple mechanisms regulate subcellular localization of human


CDC6. _J. Biol. Chem._ 276, 26947–26954 (2001). Article  CAS  Google Scholar  * Herbig, U., Griffith, J.W. & Fanning, E. Mutation of Cyclin/CDK phosphorylation sites in HsCdc6 disrupts a


late step in initiation of DNA replication in human cells. _Mol. Biol. Cell_ 11, 4117–4130 (2000). Article  CAS  Google Scholar  * Alexandrow, M.G. & Hamlin, J.L. Cdc6 chromatin


affinity is unaffected by serine-54 phosphorylation, S-phase progression, and overexpression of cyclin A. _Mol. Cell. Biol._ 24, 1614–1627 (2004). Article  CAS  Google Scholar  * Timmers,


H.T. & Tora, L. SAGA unveiled. _Trends Biochem. Sci._ 30, 7–10 (2005). Article  CAS  Google Scholar  * Burgess, S.M., Ajimura, M. & Kleckner, N. GCN5-dependent histone H3 acetylation


and RPD3-dependent histone H4 deacetylation have distinct, opposing effects on IME2 transcription, during meiosis and during vegetative growth, in budding yeast. _Proc. Natl. Acad. Sci.


USA_ 96, 6835–6840 (1999). Article  CAS  Google Scholar  * Howe, L. et al. Histone H3 specific acetyltransferases are essential for cell cycle progression. _Genes Dev._ 15, 3144–3154 (2001).


Article  CAS  Google Scholar  * Krebs, J.E., Kuo, M.H., Allis, C.D. & Peterson, C.L. Cell cycle-regulated histone acetylation required for expression of the yeast _HO_ gene. _Genes


Dev._ 13, 1412–1421 (1999). Article  CAS  Google Scholar  * Zhang, W., Bone, J.R., Edmondson, D.G., Turner, B.M. & Roth, S.Y. Essential and redundant functions of histone acetylation


revealed by mutation of target lysines and loss of the Gcn5p acetyltransferase. _EMBO J._ 17, 3155–3167 (1998). Article  CAS  Google Scholar  * Paulson, M., Press, C., Smith, E., Tanese, N.


& Levy, D.E. IFN-stimulated transcription through a TBP-free acetyltransferase complex escapes viral shutoff. _Nat. Cell Biol._ 4, 140–147 (2002). Article  CAS  Google Scholar  * Palhan,


V.B. et al. Polyglutamine-expanded ataxin-7 inhibits STAGA histone acetyltransferase activity to produce retinal degeneration. _Proc. Natl. Acad. Sci. USA_ 102, 8472–8477 (2005). Article 


CAS  Google Scholar  * Takei, Y. et al. MCM3AP, a novel acetyltransferase that acetylates replication protein MCM3. _EMBO Rep._ 2, 119–123 (2001). Article  CAS  Google Scholar  * Zarkowska,


T. & Mittnacht, S. Differential phosphorylation of the retinoblastoma protein by G1/S cyclin-dependent kinases. _J. Biol. Chem._ 272, 12738–12746 (1997). Article  CAS  Google Scholar  *


Galbiati, L., Mendoza-Maldonado, R., Gutierrez, M.I. & Giacca, M. Regulation of E2F–1 after DNA damage by p300-mediated acetylation and ubiquitination. _Cell Cycle_ 4, 930–939 (2005).


Article  CAS  Google Scholar  * Takahashi, T., Ohara, E., Nishitani, H. & Masukata, H. Multiple ORC-binding sites are required for efficient MCM loading and origin firing in fission


yeast. _EMBO J._ 22, 964–974 (2003). Article  CAS  Google Scholar  * Muratoglu, S. et al. Two different _Drosophila_ ADA2 homologues are present in distinct GCN5 histone


acetyltransferase-containing complexes. _Mol. Cell. Biol._ 23, 306–321 (2003). Article  CAS  Google Scholar  * Guelman, S. et al. Host cell factor and an uncharacterized SANT domain protein


are stable components of ATAC, a novel dAda2A/dGcn5-containing histone acetyltransferase complex in _Drosophila_. _Mol. Cell. Biol._ 26, 871–882 (2006). Article  CAS  Google Scholar  *


Vaziri, C. et al. A p53-dependent checkpoint pathway prevents rereplication. _Mol. Cell_ 11, 997–1008 (2003). Article  CAS  Google Scholar  * Nishitani, H., Lygerou, Z. & Nishimoto, T.


Proteolysis of DNA replication licensing factor Cdt1 in S-phase is performed independently of geminin through its N-terminal region. _J. Biol. Chem._ 279, 30807–30816 (2004). Article  CAS 


Google Scholar  * Drury, L.S., Perkins, G. & Diffley, J.F. The Cdc4/34/53 pathway targets Cdc6p for proteolysis in budding yeast. _EMBO J._ 16, 5966–5976 (1997). Article  CAS  Google


Scholar  * Duursma, A. & Agami, R. p53-dependent regulation of Cdc6 protein stability controls cellular proliferation. _Mol. Cell. Biol._ 25, 6937–6947 (2005). Article  CAS  Google


Scholar  * Coverley, D., Laman, H. & Laskey, R.A. Distinct roles for cyclins E and A during DNA replication complex assembly and activation. _Nat. Cell Biol._ 4, 523–528 (2002). Article


  CAS  Google Scholar  * Pelizon, C., Madine, M.A., Romanowski, P. & Laskey, R.A. Unphosphorylatable mutants of Cdc6 disrupt its nuclear export but still support DNA replication once per


cell cycle. _Genes Dev._ 14, 2526–2533 (2000). Article  CAS  Google Scholar  * Oehlmann, M., Score, A.J. & Blow, J.J. The role of Cdc6 in ensuring complete genome licensing and S phase


checkpoint activation. _J. Cell Biol._ 165, 181–190 (2004). Article  CAS  Google Scholar  * Clay-Farrace, L., Pelizon, C., Santamaria, D., Pines, J. & Laskey, R.A. Human replication


protein Cdc6 prevents mitosis through a checkpoint mechanism that implicates Chk1. _EMBO J._ 22, 704–712 (2003). Article  CAS  Google Scholar  * Kikuchi, H., Takami, Y. & Nakayama, T.


GCN5: a supervisor in all-inclusive control of vertebrate cell cycle progression through transcription regulation of various cell cycle-related genes. _Gene_ 347, 83–97 (2005). Article  CAS


  Google Scholar  * Iizuka, M., Matsui, T., Takisawa, H. & Smith, M.M. Regulation of replication licensing by acetyltransferase Hbo1. _Mol. Cell. Biol._ 26, 1098–1108 (2006). Article 


CAS  Google Scholar  * Burke, T.W., Cook, J.G., Asano, M. & Nevins, J.R. Replication factors MCM2 and ORC1 interact with the histone acetyltransferase HBO1. _J. Biol. Chem._ 276,


15397–15408 (2001). Article  CAS  Google Scholar  * Iizuka, M. & Stillman, B. Histone acetyltransferase HBO1 interacts with the ORC1 subunit of the human initiator protein. _J. Biol.


Chem._ 274, 23027–23034 (1999). Article  CAS  Google Scholar  * Yang, X.J. Multisite protein modification and intramolecular signaling. _Oncogene_ 24, 1653–1662 (2005). Article  CAS  Google


Scholar  * Bode, A.M. & Dong, Z. Post-translational modification of p53 in tumorigenesis. _Nat. Rev. Cancer_ 4, 793–805 (2004). Article  CAS  Google Scholar  * Matsuzaki, H. et al.


Acetylation of FoxO1 alters its DNA-binding ability and sensitivity to phosphorylation. _Proc. Natl. Acad. Sci. USA_ 102, 11278–11283 (2005). Article  CAS  Google Scholar  * Ozaki, T. et al.


Functional implication of p73 protein stability in neuronal cell survival and death. _Cancer Lett._ 228, 29–35 (2005). Article  CAS  Google Scholar  * Vervoorts, J., Luscher-Firzlaff, J.M.


& Luscher, B. The ins and outs of MYC regulation by posttranslational mechanisms. _J. Biol. Chem._ 281, 34725–34729 (2006). Article  CAS  Google Scholar  * Chan, H.M., Krstic-Demonacos,


M., Smith, L., Demonacos, C. & La Thangue, N.B. Acetylation control of the retinoblastoma tumour-suppressor protein. _Nat. Cell Biol._ 3, 667–674 (2001). Article  CAS  Google Scholar  *


Marzio, G. et al. E2F family members are differentially regulated by reversible acetylation. _J. Biol. Chem._ 275, 10887–10892 (2000). Article  CAS  Google Scholar  * Marcello, A., Massimi,


P., Banks, L. & Giacca, M. Adeno-associated virus type 2 rep protein inhibits human papillomavirus type 16 E2 recruitment of the transcriptional coactivator p300. _J. Virol._ 74,


9090–9098 (2000). Article  CAS  Google Scholar  * Marcello, A. et al. Recruitment of human cyclin T1 to nuclear bodies through direct interaction with the PML protein. _EMBO J._ 22,


2156–2166 (2003). Article  CAS  Google Scholar  Download references ACKNOWLEDGEMENTS This work was supported by grants from the FIRB program of the “Ministero dell'Istruzione,


Universita' e Ricerca,” Italy and from the “Fondazione CRTrieste” of Trieste, Italy. The authors are indebted to H. Masai (Tokyo Metropolitan Institute of Medical Science) for helpful


discussion and to A. Dutta (University of Virginia), K. Helin (Biotech Research and Innovation Centre and Centre for Epigenetics), M. Benkirane (Institut de G–énétique Humaine), J. Pines


(Wellcome Trust/Cancer Research UK Gurdon Institute) and H. Masai for the gift of reagents. The authors are grateful to V. Liverani for excellent technical support and to S. Kerbavcic for


superb editorial assistance. AUTHOR INFORMATION Author notes * Roberta Paolinelli Present address: Present address: IFOM-Institute of Molecular Oncology-Foundation, Milan, Italy., * Roberta


Paolinelli and Ramiro Mendoza-Maldonado: These authors contributed equally to this work. AUTHORS AND AFFILIATIONS * Molecular Biology Laboratory, Scuola Normale Superiore, AREA della Ricerca


del CNR, Pisa, Italy Roberta Paolinelli & Anna Cereseto * Molecular Medicine Laboratory, International Centre for Genetic Engineering and Biotechnology (ICGEB), Trieste, Italy Roberta


Paolinelli, Ramiro Mendoza-Maldonado & Mauro Giacca * Department of Biomedicine, Faculty of Medicine, University of Trieste, Italy Mauro Giacca Authors * Roberta Paolinelli View author


publications You can also search for this author inPubMed Google Scholar * Ramiro Mendoza-Maldonado View author publications You can also search for this author inPubMed Google Scholar *


Anna Cereseto View author publications You can also search for this author inPubMed Google Scholar * Mauro Giacca View author publications You can also search for this author inPubMed Google


Scholar CONTRIBUTIONS All experiments were performed by R.P. and R.M.-M.; A.C. took part in the design of the initial CDC6 acetylation experiments; M.G. supervised the work and wrote the


manuscript. CORRESPONDING AUTHOR Correspondence to Mauro Giacca. SUPPLEMENTARY INFORMATION SUPPLEMENTARY TEXT AND FIGURES Supplementary Figures 1–9 (PDF 5772 kb) RIGHTS AND PERMISSIONS


Reprints and permissions ABOUT THIS ARTICLE CITE THIS ARTICLE Paolinelli, R., Mendoza-Maldonado, R., Cereseto, A. _et al._ Acetylation by GCN5 regulates CDC6 phosphorylation in the S phase


of the cell cycle. _Nat Struct Mol Biol_ 16, 412–420 (2009). https://doi.org/10.1038/nsmb.1583 Download citation * Received: 12 May 2008 * Accepted: 04 March 2009 * Published: 03 April 2009


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