Identification of novel candidate loci for anorexia nervosa at 1q41 and 11q22 in japanese by a genome-wide association analysis with microsatellite markers

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ABSTRACT The Japanese Genetic Research Group for Eating Disorders (JGRED) is a multisite collaborative study group that was organized for the systematic recruitment of patients with an


eating disorder for the purpose of genetic study in Japan. We conducted a genome-wide case–control association study using 23 465 highly polymorphic microsatellite (MS) markers to identify


genomic loci related to anorexia nervosa (AN). Pooled DNA typing in two screening stages, followed by individual typing of 320 AN cases and 341 controls, allowed us to identify 10 MS markers


to be associated with AN. To narrow down genomic regions responsible for the association of these MS markers, we further conducted a single-nucleotide polymorphism (SNP) association


analysis for 7 of the 10 loci in 331 AN cases and 872 controls, which include the 320 AN cases and the 341 controls genotyped in the MS screening, respectively. Two loci, namely 1q41 and


11q22, remained significantly associated with AN in the SNP-based fine mapping, indicating the success in narrowing down susceptibility regions for AN. Neither of these loci showed a


positive evidence of association with bulimia nervosa. The most significant association was observed at SNP rs2048332 (allelic _P_-value=0.00023) located at 3′-downstream of the _SPATA17_


gene on the 1q41 locus. The association analysis for MS-SNP haplotypes detected a statistically significant association (permutation _P_-value=0.00003) of the A-4-G-T haplotype that


comprised four SNP/MS markers (rs6590474–D11S0268i–rs737582–rs7947224) on the 11q22 locus with AN. This linkage disequilibrium block spanning a 20.2-kb interval contains exon 9 of the


_CNTN5_ gene encoding contactin 5. SIMILAR CONTENT BEING VIEWED BY OTHERS GENOME-WIDE COPY NUMBER VARIATION ASSOCIATION STUDY IN ANOREXIA NERVOSA Article Open access 12 November 2024 SINGLE


NUCLEOTIDE POLYMORPHISMS (SNPS) THAT ARE ASSOCIATED WITH OBESITY AND TYPE 2 DIABETES AMONG ASIANS: A SYSTEMATIC REVIEW AND META-ANALYSIS Article Open access 29 August 2024 CHROMOSOMAL


REGIONS STRONGLY ASSOCIATED WITH WAIST CIRCUMFERENCE AND BODY MASS INDEX IN METABOLIC SYNDROME IN A FAMILY-BASED STUDY Article Open access 16 March 2021 INTRODUCTION Eating disorders (EDs)


are psychiatric conditions characterized by severe disturbances in eating behavior, and can be classified into three major types, namely anorexia nervosa (AN), bulimia nervosa (BN) and ED


not otherwise specified. AN and BN are not mutually exclusive conditions as some individuals cross over between both conditions.1, 2 It is generally believed that ED has become more frequent


over recent decades. Fairburn and Harrison3 summarized the prevalence of AN and BN to be 0.7% in teenage girls and 1–2% in 16–35-year-old females, and the incidence (per 100 000 per year)


of AN and BN to be 19 in females and 2 in males, and 29 in females and 1 in males, respectively.3 AN has the highest mortality rate (5–6%) of any psychiatric disease,4 whereas the mortality


rate of BN is reported to be 0.3%.5 The cause of ED is complex and poorly understood. However, the involvement of genetic factors in the etiology of ED has been demonstrated in family and


twin studies.6, 7, 8, 9 Twin studies have estimated the contribution of genetic factors in AN to be between 33 and 84%9 and that in BN to be between 28 and 83%.8 To search for the genetic


etiology of ED, two types of molecular genetic approaches, namely linkage studies and association studies, have been carried out (reviewed in Bulik _et al._10 and Pinheiro _et al._11).


Linkage studies for AN have detected significant linkage at two regions on chromosome 112, 13 and an additional suggestive linkage at a number of loci.13, 14 From the 1p33-p36 region, one of


the regions showing significant linkage to AN,12 serotonin 1D receptor (_HTR1D_) and opioid delta receptor (_OPRD1_) genes were further evaluated and found to exhibit significant


association with AN.15 Linkage analysis of a BN cohort detected significant linkage at 10p13 and a suggestive linkage at 14q22.2-23.1.16 Fine mapping of these regions with


significant/suggestive linkage signals will clarify whether the regions contain gene(s) relevant to AN or BN. Association studies for ED have so far been limited to candidate gene approaches


that focused on the genes, such as those involved in the regulation of feeding and body composition and those implicated in neurotransmitter pathways regulating behavior.10, 11, 17 Although


many association studies performed for ED are considered to be statistically underpowered because of their small sample sizes and/or suffer from multiple testing,10 positive findings on


_HTR1D_, _OPRD1_ and _BDNF_ genes seem promising, as their association with AN/BN has been replicated in more than one study in which relatively large numbers of samples were enrolled


(reviewed in Bulik _et al._10). Completion of the Human Genome Project18 and the rapid progress of the International HapMap Project19 dramatically increased the amount of information on


genetic markers, such as microsatellite (MS) markers and single-nucleotide polymorphisms (SNPs). Consequently, statistical strategies and genotyping platforms for genome-wide association


studies (GWASs) have been established and prevailed as a means of identifying disease susceptibility genes. Disease association studies using MS markers distributed across the human genome


have advantages over linkage analysis and the candidate gene approach. MS markers are highly polymorphic and show a high degree of heterozygosity (∼70% on average), and their linkage


disequilibrium (LD) lengths are in the 100 kb range.20, 21, 22 In this study, we adopted a practical and efficient GWAS strategy for AN using a set of 23 465 MS markers22, 23 and the DNA


pooling method, which has been adopted to identify novel susceptibility genes of rheumatoid arthritis22 and candidate loci for hypertension24 and adult height.23 We identified 10 novel loci


related to AN by the MS marker-based GWAS strategy, and subsequently conducted an SNP-based association analysis for 7 of the 10 loci to further narrow down candidate genomic intervals


responsible for AN susceptibility. MATERIALS AND METHODS SUBJECTS The patients enrolled in this study were recruited through the efforts of the Japanese Genetic Research Group for Eating


Disorders (JGRED), which comprises 67 nation-wide hospitals/institutions (the full list is available in Supplementary Table 1). A total of 456 unrelated Japanese female patients with ED (331


cases with AN and 125 cases with BN) participated in this study. According to the Diagnostic and Statistical Manual of Mental Disorders,25 218 and 113 cases were diagnosed as AN-restricting


type (AN-R) and as AN with binge eating/purging type (AN-BP), respectively. Among the 125 BN cases, 46 had histories of AN and 79 cases did not. The average age at assessment was 23.2±7.91


(s.d.) years for AN-R, 25.7±7.22 years for AN-BP and 26.3±6.77 years for BN. The lifetime minimum body mass index was 12.4±1.90 (s.d.) kg m−2 for AN-R, 12.8±2.67 kg m−2 for AN-BP and


16.2±3.47 kg m−2 for BN. A total of 872 Japanese healthy individuals participated in this study: 180 female individuals whose average age was 34.5 years (control group 1) and 692 male and


female volunteers recruited among university students (control group 2). The average age and gender ratio of control group 2 were unavailable. The ethics committees of all facilities


approved the investigation. All subjects gave their written informed consent before participation in the study. POOLED DNA CONSTRUCTION AND MS GENOTYPING Among the 27 037 MS markers


developed by Tamiya _et al._,22 23 465 (with average spacing 118.0-kb) were used in this study. Detailed information on the 27 037 MS markers is also available at the Japan Biological


Information Research Center website (http://jbirc.jbic.or.jp/gdbs/database/viewer/download/list.jsp). The pooled DNA method for MS typing was performed according to the protocol of Collins


_et al._26 with a slight modification.21 Genomic DNA was extracted from peripheral blood using the Qiagen blood mini kit (Qiagen, Hilden, Germany). DNA concentration was determined using


PicoGreen fluorescence assay (Molecular Probes, Eugene, OR, USA) as described previously.22, 26 The detailed conditions for PCR amplification and peak detection for pooled DNA and individual


genotyping were described previously.22, 24 A total of 320 AN cases and 341 controls were subjected to MS genotyping. The number of subjects for pooled DNA typing was 90 AN-R cases and 90


female controls from control group 1 in the first-stage screening, and another 90 AN-R cases and another 90 female controls from control group 1 in the second-stage screening. The number of


subjects for individual genotyping in the third screening was 140 AN cases (composed of 32 AN-R and 108 AN-BP cases) and 161 controls from control group 2. As the final step of MS screening,


positive markers were subjected to individual genotyping of all 320 AN cases and 341 controls used in the three screening stages. MS markers showing statistical significance (_P_<0.05)


in Fisher's exact test for the 2 × 2 contingency table in the first screening were subjected to the second screening. In the second and third screening stages, besides statistical


significance (_P_<0.1), consistency in the directions of effect of the associated MS allele on AN susceptibility was considered; when the allele holding statistical significance showed


the opposite direction of effect compared with that in the previous screening stage, such a marker was excluded from further analysis. SNP GENOTYPING Single-nucleotide polymorphisms in


candidate regions were selected from the SNP database (http://www2.appliedbiosystems.com/) using SNPbrowser software 3.5 (Applied Biosystems, Foster City, CA, USA). SNPs were genotyped using


TaqMan assays, which were carried out using standard protocols for ABI PRISM 7900HT Sequence Detection Systems (Applied Biosystems). A total of 331 AN cases, 125 BN cases and 872 control


individuals were subjected to SNP genotyping. The 331 AN cases consisted of the 320 cases genotyped in the MS screening and 11 additional cases. The 872 controls consisted of 180 female


controls from control group 1 and 692 controls from control group 2. STATISTICAL ANALYSES Allelic frequencies in pooled DNA genotyping were estimated from the height of peaks measured using


the PickPeak and MultiPeaks programs (Applied Biosystems). To calculate allelic _P_-values from MS genotyping data, we used Fisher's exact test for the 2 × 2 contingency tables for each


individual allele and for the 2 × _m_ contingency tables for each locus, where _m_ refers to the number of marker alleles observed in the genotyped population. The power of each of the


three-stage MS screenings was calculated using a ‘Genetic Power Calculator27 (http://pngu.mgh.harvard.edu/~purcell/gpc/)’ in the AN prevalence rate of 1%. In the three successive screening,


the overall power of the study was 72 and ∼50% for detecting an AN-susceptible allele with a genotype relative risk of 2.0 and 1.8, respectively, under an additive model in log-odds scale


when the susceptible allele (with a frequency of 0.2) and an AN-associated MS marker were in complete LD. For SNP genotyping, disease associations were assessed by the χ2 test mainly using


Haploview 4.0 software (http://www.broad.mit.edu/mpg/haploview/).28 As a multistep analysis was used, nominal _P-_values were corrected with 10 000 iterated permutations for a series of SNPs


selected for each candidate genomic interval. The significance level for SNP association was set at 0.05 throughout the study. Haplotype association analysis (100 000 iterated permutations)


was also performed using Haploview 4.0. LD blocks in each candidate locus were defined using the default algorithm, namely confidence intervals,29 of Haploview 4.0. SNPAlyze v7.0 software


(Dynacom, Mobara, Japan) was used to perform LD calculation, haplotype inference, identification of haplotype-tagging SNP/MS and case–control haplotype analysis (100 000 iterated


permutations) for combined data of MS and SNP genotypes. RESULTS PHASED GENOMIC SCREENS USING DNA POOLS In the first-stage screening, among the 23 465 MS markers subjected to genotyping,


1414 (6.0%) were considered to be statistically significant (_P_<0.05) and were subjected to the next screening stage. In the second-stage screening, among the 1414 markers tested, 158


satisfied our selection criteria: statistical significance (_P_<0.1) and the same direction of allelic effect on AN susceptibility between the first and the second screening results. In


the third screening, among the 158 markers tested, 16 satisfied our selection criteria: statistical significance (_P_<0.1) and the same direction of allelic effect throughout the MS


screening stages. We determined a significance threshold to control false-positive rates (nominal _α_=0.05) in the first stage of MS screening. In the second and third stages, considering


that our sample sizes of cases and controls are not large, we set the significance thresholds (nominal _α_=0.1) to maintain the overall statistical power of the screening. To determine the


definite allele frequencies of the selected 16 MS markers, we performed individual genotyping on all the AN cases (_n_=320) and controls (_n_=341) used in the first to third screenings. Of


the 16 markers, 10 showed a statistically significant difference by Fisher's exact test in the comparison between controls and the AN cohort (Table 1). After correction of multiple


tests with the number of alleles, 7 of 10 markers remained statistically significant (_P_c<0.05). SNP ASSOCIATION ANALYSIS TO NARROW DOWN THE REGIONS RESPONSIBLE FOR AN SUSCEPTIBILITY


From the 10 MS markers that were found to be associated with AN, we selected 7 (shown in bold in Table 1), on the basis of the gene content around each marker, as targets for SNP association


analysis to narrow down disease susceptibility loci. We primarily selected a collection of evenly spaced SNPs (11.1-kb interval on average) within a several 100-kb region surrounding each


candidate MS marker, although it should be noted that intragenic SNPs were preferentially selected from the loci of 1q41 (spermatogenesis associated 17 (_SPATA17_)), 5q15 (_CDH18_) and 18q22


(_NETO1_). The number of SNPs subjected to association analysis and the size and nucleotide positions of the corresponding genomic interval are listed for each locus in Table 2. In total,


we performed genotyping for 333 SNPs on 331 AN cases and 872 controls. Among the 251 SNPs that satisfied thresholds for the Hardy–Weinberg equilibrium (exact test _P_>0.01) and minor


allele frequency (>5%), 24 showed a statistically significant association (nominal _P_<0.05) with the AN cohort (Table 2). For each of the seven loci analyzed, nominal _P_-values were


corrected with 10 000 iterated permutations using Haploview 4.0. In all, 3 SNPs, all of which are located on 1q41, out of the 24 SNPs remained statistically significant (_P_c<0.05)


(underlined in Table 2). Subsequently, using Haploview 4.0, we inferred LD block structures for each candidate chromosomal region, and performed a haplotype association analysis (100 000


iterated permutations) for the constructed LD blocks. Significant association (_P_c<0.05) with the AN cohort was detected in three of the six SNP haplotype blocks defined in the 1q41


locus, and in one of the eight blocks defined in the 11q22 locus (Figure 1 and Table 3). 1Q41 A total of 38 SNPs were selected for genotyping within a 337.3-kb interval, including the


AN-associated MS marker D1S0562i. Among 30 SNPs subjected to association analysis, 7 showed a statistically significant association (_P_<0.05) with the AN cohort (Table 2). All the seven


SNPs were located at 3′-downstream of the _SPATA17_ gene (Figure 1, left). SNP rs2048332 showed the most significant association (allelic _P_=0.00023) and was further analyzed under


different genetic models. Association analysis under a recessive model for rs2048332 showed the lowest _P_-value of 0.00015 with the CC genotype, indicating that the CC genotype of rs2048332


has a susceptible effect on the AN phenotype in the Japanese (odds ratio=1.73, confidence interval, 1.30–2.31). Among the three AN-associated haplotype blocks (1q41-#4, #5 and #6 in Figure


1, left and Table 3), 1q41-#5 that comprised two SNPs, namely rs1397178 and rs2048332, spanning a 10.2-kb interval, was found to be most significantly associated (_P_c=0.0039). The


AN-associated MS marker D1S0562i was located in block 1q41-#6, which comprised five SNPs spanning a 38.1-kb interval, and was also associated with AN (_P_c=0.038). Four of the five SNPs


binned to haplotype block 1q41-#6, rs17691163, rs34418611, rs1934216 and rs1538555, were in a relatively strong pairwise LD (_D′_=0.72–0.75) with D1S0562i, whereas the most significant SNP,


rs2048332, in 1q41-#5 block was in modest LD (_D′_=0.46) with it. The four SNPs and D1S0562i (rs17691163–D1S0562i–rs34418611–rs1934216–rs1538555) were selected as tags captured through LD in


block 1q41-#6. These haplotype tags were subjected to an MS-SNP haplotype-based association analysis: one haplotype (G-2-A-T-G), tagged by an AN-associated risk allele of D1S0562i


(Supplementary Table 2), was significantly associated with AN (_P_c=0.0065) (Table 4). This association was comparable with those observed in the SNP-haplotype analysis in two haplotype


blocks 1q41-#5 (_P_c=0.0039) and 1q41-#6 (_P_c=0.038) in terms of statistical significance. 11Q22 A total of 66 SNPs were selected from a 699.8-kb interval surrounding the AN-associated MS


marker D11S0268i. Among the 56 SNPs subjected to association analysis, 3 (rs12574821, rs1349782 and rs6590474) showed a statistically significant association (_P_<0.05) with the AN cohort


(Table 2). These associated SNPs were found to be located in the eighth intron of the _CNTN5_ gene (GenBank accession no. NM_014361). Although these three SNPs did not hold statistical


significance after multiple-testing correction by permutation tests, a haplotype composed of five SNPs (rs6590474, rs7129985, rs1901860, rs737582 and rs7947224) spanning a 20.2-kb interval


showed a statistically significant association with AN (_P_c=0.0082) in the haplotype association analysis (11q22-#5 in Figure 1, right and Table 3). Exon 9 of _CNTN5_ was included in the


20.2-kb interval. The AN-associated MS marker, D11S0268i, was located in the AN-associated 11q22-#5 block. In this block, D11S0268i was in a strong pairwise LD (_D′_=0.81–0.90) with each of


the five SNPs binned to this block. As three SNPs (rs6590474, rs737582 and rs7947224) and D11S0268i were selected as tags captured through LD in the 11q22-#5 block, we further conducted an


MS-SNP haplotype-based association study within the block using these four markers (rs6590474, D11S0268i, rs737582 and rs7947224). As shown in Table 4, the A-4-G-T haplotype was


overrepresented in AN cases with the greatest statistical significance (_P_c=0.00003). This MS-SNP haplotype contained both of the significantly associated risk alleles (A allele and 4) at


SNP rs6590474 (Table 2) and D11S0268i (Supplementary Table 3). ASSESSMENT OF POSSIBLE GENDER EFFECTS IN THE DETECTED ASSOCIATION OF 1Q41 AND 11Q22 WITH AN Owing to the limited number of


female individuals whose age matches with the average age of the AN cases in our control samples, we adopted a population-based control group to search for AN susceptibility loci. Therefore,


although 180 female controls (control group 1, average age: 34.5 years) were genotyped in the first and second stages of MS screening, an additional 692 control individuals enrolled in the


later stages (161 individuals in the third stage of MS screening and all of 692 individuals in the SNP association analysis) consisted of male and female individuals. To assess whether the


detected association of the 1q41 and 11q22 loci to AN was inflated by this partial mismatch in gender between case and control populations, we conducted a stratified analysis for 7 SNPs on


1q41 and for 3 SNPs on 11q22 (Table 2) that showed a significant association with AN. When control group 1 (180 females) and the AN cohort were subjected to association analysis, all 10 SNPs


were detected to be associated (_P_<0.05) with AN (Supplementary Table 4). These results assure that the association of the 1q41 and 11q22 loci with AN detected in this study is not


because of inflation caused by the inclusion of male individuals in the control population. ASSOCIATION ANALYSIS FOR A BN COHORT To assess whether the genomic intervals identified to be


associated with AN in this study are also involved in the genetic etiology of BN, we conducted an SNP association analysis for BN cases and controls. The 7 SNPs from the 1q41 locus and the 3


SNPs from the 11q22 locus, which showed a statistically significant association (_P_<0.05) with AN before multiple-testing correction, were subjected to SNP genotyping on the cohort of


125 BN cases. None of the 10 SNPs showed a statistically significant association with BN (data not shown). DISCUSSION We have completed a genome-wide association analysis for AN using 23 465


MS markers. To our knowledge, this is the first GWAS performed for EDs. Among the 10 candidate loci we identified, 9 are reported to be associated with AN for the first time in this study.


Only one locus, D1S0016i on 1p36, overlaps with the chromosomal region of 1p33-p36 that has already been reported to show significant linkage to AN.12 Through an SNP association analysis for


the seven selected candidate regions to narrow down genomic intervals involved with AN susceptibility, we tentatively identified a 10.2-kb genomic interval (the haplotype block 1q41-#5)


located at 3′-downstream of the _SPATA17_ gene as a region associated with AN. The MS-SNP haplotype-based association analysis also indicated the association of haplotype block 1q41-#6 with


AN with a similar statistical significance. _SPATA17_ encodes a 361 amino-acid protein that contains three highly conserved IQ motifs and is strongly expressed in the testis.30 It is unknown


whether the SPATA17 protein has any physiological roles in neuronal tissues. It should be noted that the 10.2-kb critical interval coincides with the exon–intron structure of the


uncharacterized mRNA sequence BC040896, which is derived from a cDNA library made from brain (adult medulla) RNA. Another genomic region identified to be associated with AN in this study is


a 20.2-kb interval (the haplotype block 11q22-#5), spanning from the eighth to the ninth intron of the _CNTN5_ gene on 11q22. Furthermore, we found that one MS-SNP haplotype (A-4-G-T), which


includes two AN-associated risk alleles at SNP rs6590474 and MS D11S0268i, was significantly overrepresented in AN cases. _CNTN5_ encodes a member of the contactin family known to function


during the formation of neuronal interactions. It is reported that the mouse line deficient of _Cntn1_, another member of the contactin family, exhibits an ataxic and anorectic phenotype.31,


32 In human adult tissues examined using northern blot analysis, _CNTN5_ has been shown to be predominantly expressed in the brain and thyroid.33 In various regions of an adult brain


examined, the gene was found to be expressed with highest levels in the occipital lobe and amygdala, followed by the cerebral cortex, frontal lobe, thalamus and temporal lobe.33 Although


neuronal activity in the auditory system is reported to be impaired in the mouse line deficient for _Cntn5_, no anorexic phenotype has been described.34 Although causative SNPs are not yet


determined, we have successfully mapped genetic association with AN to at least two genomic regions on 1q41 and 11q22 and narrowed down an AN-associated genomic interval for each locus by


haplotype association analysis. Further replication analysis using independent patient/control populations for AN-associated SNPs and functional analyses for the genes or for particular


genomic regions in these loci will better clarify the impact of these SNPs/genes in the genetic etiology of AN. It should also be noted that additional common variants are likely to have


roles in the development of AN because this study was not well powered to detect susceptible loci with relatively small genetic risks. Additional gender/age-matched cohorts consisting of


much larger numbers of cases and controls need to be used to improve statistical power in MS-based genome-wide association analysis. ACCESSION CODES ACCESSIONS GENBANK/EMBL/DDBJ * NM_014361


REFERENCES * Tozzi, F., Thornton, L. M., Klump, K. L., Fichter, M. M., Halmi, K. A., Kaplan, A. S. _et al_. Symptom fluctuation in eating disorders: correlates of diagnostic crossover. _Am.


J. Psychiatry_ 162, 732–740 (2005). Article  Google Scholar  * Nishimura, H., Komaki, G., Ando, T., Nakahara, T., Oka, T., Kawai, K. _et al_. Japanese Genetic Research Group for Eating


Disorders. Psychological and weight-related characteristics of patients with anorexia nervosa-restricting type who later develop bulimia nervosa. _Biopsychosoc. Med._ 2, 5 (2008). Article 


Google Scholar  * Fairburn, C. G., Harrison, P. J. Eating disorders. _Lancet_ 361, 407–416 (2003). Article  Google Scholar  * Birmingham, C. L., Su, J., Hlynsky, J. A., Goldner, E. M., Gao,


M. The mortality rate from anorexia nervosa. _Int. J. Eat. Disord._ 38, 143–146 (2005). Article  Google Scholar  * Keel, P. K., Mitchell, J. E. Outcome in bulimia nervosa. _Am. J.


Psychiatry_ 154, 313–321 (1997). Article  CAS  Google Scholar  * Lilenfeld, L. R., Kaye, W. H., Greeno, C. G., Merikangas, K. R., Plotnicov, K., Pollice, C. _et al_. A controlled family


study of anorexia nervosa and bulimia nervosa: psychiatric disorders in first-degree relatives and effects of proband comorbidity. _Arch. Gen. Psychiatry_ 55, 603–610 (1998). Article  CAS 


Google Scholar  * Strober, M., Freeman, R., Lampert, C., Diamond, J., Kaye, W. Controlled family study of anorexia nervosa and bulimia nervosa: evidence of shared liability and transmission


of partial syndromes. _Am. J. Psychiatry_ 157, 393–401 (2000). Article  CAS  Google Scholar  * Bulik, C. M., Sullivan, P. F., Wade, T. D., Kendler, K. S. Twin studies of eating disorders: a


review. _Int. J. Eat. Disord._ 27, 1–20 (2000). Article  CAS  Google Scholar  * Wade, T. D., Bulik, C. M., Neale, M., Kendler, K. S. Anorexia nervosa and major depression: shared genetic and


environmental risk factors. _Am. J. Psychiatry_ 157, 469–471 (2000). Article  CAS  Google Scholar  * Bulik, C. M., Slof-Op't Landt, M. C., van Furth, E. F., Sullivan, P. F. The


genetics of anorexia nervosa. _Annu. Rev. Nutr._ 27, 263–275 (2007). Article  CAS  Google Scholar  * Pinheiro, A. P., Sullivan, P. F., Bacaltchuck, J., Prado-Lima, P. A., Bulik, C. M.


Genetics in eating disorders: extending the boundaries of research. _Rev. Bras. Psiquiatr._ 28, 218–225 (2006). Article  Google Scholar  * Grice, D. E., Halmi, K. A., Fichter, M. M.,


Strober, M., Woodside, D. B., Treasure, J. T. _et al_. Evidence for a susceptibility gene for anorexia nervosa on chromosome 1. _Am. J. Hum. Genet._ 70, 787–792 (2002). Article  CAS  Google


Scholar  * Devlin, B., Bacanu, S. A., Klump, K. L., Bulik, C. M., Fichter, M. M., Halmi, K. A. _et al_. Linkage analysis of anorexia nervosa incorporating behavioral covariates. _Hum. Mol.


Genet._ 11, 689–696 (2002). Article  CAS  Google Scholar  * Bacanu, S. A., Bulik, C. M., Klump, K. L., Fichter, M. M., Halmi, K. A., Keel, P. _et al_. Linkage analysis of anorexia and


bulimia nervosa cohorts using selected behavioral phenotypes as quantitative traits or covariates. _Am. J. Med. Genet. B. Neuropsychiatr. Genet._ 139, 61–68 (2005). Article  Google Scholar 


* Bergen, A. W., van den Bree, M. B., Yeager, M., Welch, R., Ganjei, J. K., Haque, K. _et al_. Candidate genes for anorexia nervosa in the 1p33-36 linkage region: serotonin 1D and delta


opioid receptor loci exhibit significant association to anorexia nervosa. _Mol. Psychiatry_ 8, 397–406 (2003). Article  CAS  Google Scholar  * Bulik, C. M., Devlin, B., Bacanu, S. A.,


Thornton, L., Klump, K. L., Fichter, M. M. _et al_. Significant linkage on chromosome 10p in families with bulimia nervosa. _Am. J. Hum. Genet._ 72, 200–207 (2003). Article  CAS  Google


Scholar  * Klump, K. L., Gobrogge, K. L. A review and primer of molecular genetic studies of anorexia nervosa. _Int. J. Eat. Disord._ 37, S43–S48 (2005). Article  Google Scholar  *


International Human Genome Sequencing Consortium. Finishing the euchromatic sequence of the human genome. _Nature_ 431, 931–945 (2004). Article  Google Scholar  * International HapMap


Consortium. A second generation human haplotype map of over 3.1 million SNPs. _Nature_ 449, 851–861 (2007). Article  Google Scholar  * Oka, A., Tamiya, G., Tomizawa, M., Ota, M., Katsuyama,


Y., Makino, S. _et al_. Association analysis using refined microsatellite markers localizes a susceptibility locus for psoriasis vulgaris within a 111 kb segment telomeric to the HLA-C gene.


_Hum. Mol. Genet._ 8, 2165–2170 (1999). Article  CAS  Google Scholar  * Oka, A., Hayashi, H., Tomizawa, M., Okamoto, K., Suyun, L., Hui, J. _et al_. Localization of a non-melanoma skin


cancer susceptibility region within the major histocompatibility complex by association analysis using microsatellite markers. _Tissue Antigens_ 61, 203–210 (2003). Article  CAS  Google


Scholar  * Tamiya, G., Shinya, M., Imanishi, T., Ikuta, T., Makino, S., Okamoto, K. _et al_. Whole genome association study of rheumatoid arthritis using 27 039 microsatellites. _Hum. Mol.


Genet._ 14, 2305–2321 (2005). Article  CAS  Google Scholar  * Kimura, T., Kobayashi, T., Munkhbat, B., Oyungerel, G., Bilegtsaikhan, T., Anar, D. _et al_. Genome-wide association analysis


with selective genotyping identifies candidate loci for adult height at 8q21.13 and 15q22.33-q23 in Mongolians. _Hum. Genet._ 123, 655–660 (2008). Article  CAS  Google Scholar  * Yatsu, K.,


Mizuki, N., Hirawa, N., Oka, A., Itoh, N., Yamane, T. _et al_. High-resolution mapping for essential hypertension using microsatellite markers. _Hypertension_ 49, 446–452 (2007). Article 


CAS  Google Scholar  * American Psychiatric Association. _Diagnostic and Statistical Manual of Mental Disorders_, 4th edn. (American Psychiatric Association: Washington, DC, 1994). *


Collins, H. E., Li, H., Inda, S. E., Anderson, J., Laiho, K., Tuomilehto, J. _et al_. A simple and accurate method for determination of microsatellite total allele content differences


between DNA pools. _Hum. Genet._ 106, 218–226 (2000). Article  CAS  Google Scholar  * Purcell, S., Cherny, S. S., Sham, P. C. Genetic Power Calculator: design of linkage and association


genetic mapping studies of complex traits. _Bioinformatics_ 19, 149–150 (2003). Article  CAS  Google Scholar  * Barrett, J. C., Fry, B., Maller, J., Daly, M. J. Haploview: analysis and


visualization of LD and haplotype maps. _Bioinformatics_ 21, 263–265 (2005). Article  CAS  Google Scholar  * Gabriel, S. B., Schaffner, S. F., Nguyen, H., Moore, J. M., Roy, J., Blumenstiel,


B. _et al_. The structure of haplotype blocks in the human genome. _Science_ 296, 2225–2229 (2002). Article  CAS  Google Scholar  * Deng, Y., Hu, LS., Lu, GX. Expression and identification


of a novel apoptosis gene Spata17 (MSRG-11) in mouse spermatogenic cells. _Acta. Biochim. Biophys. Sin. (Shanghai)_ 38, 37–45 (2006). Article  CAS  Google Scholar  * Johansen, J. E.,


Fetissov, S. O., Bergström, U., Nilsson, I., Faÿ, C., Ranscht, B. _et al_. Evidence for hypothalamic dysregulation in mouse models of anorexia as well as in humans. _Physiol. Behav._ 92,


278–282 (2007). Article  CAS  Google Scholar  * Fetissov, S. O., Bergström, U., Johansen, J. E., Hökfelt, T., Schalling, M., Ranscht, B. Alterations of arcuate nucleus neuropeptidergic


development in contactin-deficient mice: comparison with anorexia and food-deprived mice. _Eur. J. Neurosci._ 22, 3217–3228 (2005). Article  Google Scholar  * Kamei, Y., Takeda, Y.,


Teramoto, K., Tsutsumi, O., Taketani, Y., Watanabe, K. Human NB-2 of the contactin subgroup molecules: chromosomal localization of the gene (CNTN5) and distinct expression pattern from other


subgroup members. _Genomics_ 69, 113–119 (2000). Article  CAS  Google Scholar  * Li, H., Takeda, Y., Niki, H., Ogawa, J., Kobayashi, S., Kai, N. _et al_. Aberrant responses to acoustic


stimuli in mice deficient for neural recognition molecule NB-2. _Eur. J. Neurosci._ 17, 929–936 (2003). Article  Google Scholar  Download references ACKNOWLEDGEMENTS This study was performed


under the management of the Japan Biological Informatics Consortium (JBIC) and was supported by grants from the New Energy and Industrial Technology Development Organization (NEDO). This


study was also supported by Grant-in-Aid for Scientific Research on Priority Areas from MEXT, and by Grant-in-Aid for Young Scientists (B) from JSPS. We thank Karin Ohki for her technical


assistance. AUTHOR INFORMATION Author notes * Kazuhiko Nakabayashi Present address: 7Current address: Department of Maternal-Fetal Biology, National Research Institute for Child Health and


Development, 2-10-1 Okura, Setagaya, Tokyo 157-8535, Japan, AUTHORS AND AFFILIATIONS * Department of Pathology, Research Institute, International Medical Center of Japan, Shinjuku, Tokyo,


Japan Kazuhiko Nakabayashi, Mayuko Ishikawa & Junko Nomoto * Department of Cell Biology, Faculty of Medicine, Fukuoka University, Jonan, Fukuoka, Japan Kazuhiko Nakabayashi & Senji


Shirasawa * Department of Psychosomatic Research, National Institute of Mental Health, National Center of Neurology and Psychiatry, Ogawahigashicho, Kodaira, Japan Gen Komaki & Tetsuya


Ando * Department of Molecular Life Science, Tokai University School of Medicine, Isehara, Japan Atsushi Tajima, Akira Oka & Hidetoshi Inoko * Department of Maternal-Fetal Biology,


National Research Institute for Child Health and Development, Setagaya, Tokyo, Japan Kenichiro Hata * International Medical Center of Japan, Shinjuku, Tokyo, Japan Takehiko Sasazuki Authors


* Kazuhiko Nakabayashi View author publications You can also search for this author inPubMed Google Scholar * Gen Komaki View author publications You can also search for this author inPubMed


 Google Scholar * Atsushi Tajima View author publications You can also search for this author inPubMed Google Scholar * Tetsuya Ando View author publications You can also search for this


author inPubMed Google Scholar * Mayuko Ishikawa View author publications You can also search for this author inPubMed Google Scholar * Junko Nomoto View author publications You can also


search for this author inPubMed Google Scholar * Kenichiro Hata View author publications You can also search for this author inPubMed Google Scholar * Akira Oka View author publications You


can also search for this author inPubMed Google Scholar * Hidetoshi Inoko View author publications You can also search for this author inPubMed Google Scholar * Takehiko Sasazuki View author


publications You can also search for this author inPubMed Google Scholar * Senji Shirasawa View author publications You can also search for this author inPubMed Google Scholar CONSORTIA


JAPANESE GENETIC RESEARCH GROUP FOR EATING DISORDERS (JGRED) CORRESPONDING AUTHOR Correspondence to Kazuhiko Nakabayashi. ADDITIONAL INFORMATION Supplementary Information accompanies the


paper on Journal of Human Genetics website (http://www.nature.com/jhg) SUPPLEMENTARY INFORMATION SUPPLEMENTARY INFORMATION (XLS 47 KB) RIGHTS AND PERMISSIONS Reprints and permissions ABOUT


THIS ARTICLE CITE THIS ARTICLE Nakabayashi, K., Komaki, G., Tajima, A. _et al._ Identification of novel candidate loci for anorexia nervosa at 1q41 and 11q22 in Japanese by a genome-wide


association analysis with microsatellite markers. _J Hum Genet_ 54, 531–537 (2009). https://doi.org/10.1038/jhg.2009.74 Download citation * Received: 15 April 2009 * Revised: 02 July 2009 *


Accepted: 15 July 2009 * Published: 14 August 2009 * Issue Date: September 2009 * DOI: https://doi.org/10.1038/jhg.2009.74 SHARE THIS ARTICLE Anyone you share the following link with will be


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initiative KEYWORDS * anorexia nervosa * bulimia nervosa * eating disorders * genome-wide association study * microsatellite markers * SNPs